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RE: Error in Delft3d Compilation - v67888 in macOS Catalina 10.15.7 (19H2)

Luiz Ferreira, modified 3 Years ago.

Error in Delft3d Compilation - v67888 in macOS Catalina 10.15.7 (19H2)

Youngling Posts: 4 Join Date: 9/13/20 Recent Posts
Dear all,I am having problems in compiling Delft3d v67888 (latest version) in macOS Catalina 10.15.7 (19H2). I am using the following package:  
cmake 3.18.4_0gcc9 9.3.0_2
gmake 4.3_0metis 5.1.0_3 
netcdf 4.7.4_1
netcdf-fortran 4.5.3_0openmpi 4.0.1_1
openmpi-default 4.0.1_1netcdf 4.7.4_1
netcdf-fortran @4.5.3_0 (gcc9)openmpi @4.0.1_1
openmpi-default @4.0.1_1 (gcc9)Bellow the error:Making all in wave
Making all in src
mpif90 -I../../../../../engines_gpl/wave/packages/wave/include -I../../../../../engines_gpl/wave/packages/data/src -I../../../../../engines_gpl/wave/packages/manager/src -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I../../../../../utils_lgpl/ec_module/packages/ec_module/src/meteo -I../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src -I../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp -c -o wave_exe.o  wave_exe.f90
/bin/sh ../../../../../libtool  --tag=FC   --mode=link mpif90 -I../../../../../engines_gpl/wave/packages/wave/include -I../../../../../engines_gpl/wave/packages/data/src -I../../../../../engines_gpl/wave/packages/manager/src -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I../../../../../utils_lgpl/ec_module/packages/ec_module/src/meteo -I../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src -I../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp   -o wave wave_exe.o ../../../../../engines_gpl/wave/packages/manager/src/libmanager.la ../../../../../engines_gpl/wave/packages/kernel/src/libkernel.la ../../../../../engines_gpl/wave/packages/io/src/libio.la ../../../../../engines_gpl/wave/packages/data/src/libdata.la ../../../../../utils_lgpl/gridgeom/packages/gridgeom/src/libgridgeom.la ../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync/libDelftIO.la ../../../../../utils_lgpl/esmfsm/packages/esmfsm/src/fsm/libESMFSM.la ../../../../../utils_lgpl/ec_module/packages/ec_module/src/libECModule.la ../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src/libIONetcdf.la ../../../../../utils_lgpl/nefis/packages/nefis/src/libNefis.la ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/libDeltaresCommon.la ../../../../../utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/libkdtreewrapper.la ../../../../../third_party_open/kdtree2/src-f90/libkdtree2f.la ../../../../../third_party_open/triangle/libtriangle_c.la -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm -lpthread  -ldl -lexpat -lstdc++
libtool: link: mpif90 -I../../../../../engines_gpl/wave/packages/wave/include -I../../../../../engines_gpl/wave/packages/data/src -I../../../../../engines_gpl/wave/packages/manager/src -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I../../../../../utils_lgpl/ec_module/packages/ec_module/src/meteo -I../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src -I../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync -DWITH_DELFTONLINE -g -O2 -ffree-line-length-none -cpp -o wave wave_exe.o  ../../../../../engines_gpl/wave/packages/manager/src/.libs/libmanager.a ../../../../../engines_gpl/wave/packages/kernel/src/.libs/libkernel.a ../../../../../engines_gpl/wave/packages/io/src/.libs/libio.a -L/opt/local/lib ../../../../../engines_gpl/wave/packages/data/src/.libs/libdata.a ../../../../../utils_lgpl/gridgeom/packages/gridgeom/src/.libs/libgridgeom.a ../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync/.libs/libDelftIO.a ../../../../../utils_lgpl/esmfsm/packages/esmfsm/src/fsm/.libs/libESMFSM.a ../../../../../utils_lgpl/ec_module/packages/ec_module/src/.libs/libECModule.a -lnetcdf -lnetcdff ../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src/.libs/libIONetcdf.a ../../../../../utils_lgpl/nefis/packages/nefis/src/.libs/libNefis.a ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/.libs/libDeltaresCommon.a ../../../../../utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/.libs/libkdtreewrapper.a ../../../../../third_party_open/kdtree2/src-f90/.libs/libkdtree2f.a ../../../../../third_party_open/triangle/.libs/libtriangle_c.a -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm -lpthread -ldl -lexpat -lstdc++
Undefined symbols for architecture x86_64:
  "_FILE_SEEK_not_defined", referenced from:
      _cutil_mf_backspace_ in libDeltaresCommon.a(cutil.o)
  "_FILE_TELL_not_defined", referenced from:
      _cutil_mf_read_ in libDeltaresCommon.a(cutil.o)
      _cutil_mf_getpos_ in libDeltaresCommon.a(cutil.o)
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make[6]: *** [wave] Error 1
make[5]: *** [all-recursive] Error 1
make[4]: *** [all-recursive] Error 1
make[3]: *** [all-recursive] Error 1
make[2]: *** [all-recursive] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2

Thanks for the attention and the help!LP
Luiz Ferreira, modified 3 Years ago.

RE: Error in Delft3d Compilation - v67888 in macOS Catalina 10.15.7 (19H2)

Youngling Posts: 4 Join Date: 9/13/20 Recent Posts
The problems repeats with versions 67801 and 67763.
Also, the error message appears when I run the command make at /engines_gpl/dflowfm and /engines_gpl/wave.
"Making all in dflowfm-cli_exeMaking all in src/bin/sh ../../../../../libtool  --tag=FC   --mode=link mpif90   -DWITH_DELFTONLINE   -DHAVE_DISPLAY=0 -I/opt/local/include -I/opt/local/include      -g -O2 -ffree-line-length-none -cpp   -o dflowfm net_main.o ../../../../../engines_gpl/dflowfm/packages/dflowfm_kernel/src/libdflowfm.la ../../../../../utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/libkdtreewrapper.la ../../../../../utils_lgpl/gridgeom/packages/gridgeom/src/libgridgeom.la  -ldl -lexpat -lstdc++  -L/opt/local/lib -lnetcdf -L/opt/local/lib -lnetcdff -lnetcdff -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/opt/local/lib/openmpi-mp -L/opt/local/lib -L/opt/local/lib/openmpi-mp -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -I/opt/local/include/openmpi-mp -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/opt/local/lib/openmpi-mp -L/opt/local/lib -L/opt/local/lib/openmpi-mp -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi   libtool: link: mpif90 -DWITH_DELFTONLINE -DHAVE_DISPLAY=0 -I/opt/local/include -I/opt/local/include -g -O2 -ffree-line-length-none -cpp -o .libs/dflowfm net_main.o -Wl,-flat_namespace -Wl,-commons -Wl,use_dylibs -I/opt/local/lib/openmpi-mp -I/opt/local/include/openmpi-mp -Wl,-flat_namespace -Wl,-commons -Wl,use_dylibs -I/opt/local/lib/openmpi-mp  ../../../../../engines_gpl/dflowfm/packages/dflowfm_kernel/src/.libs/libdflowfm.dylib -L/opt/local/lib -L/opt/local/lib/openmpi-mp /Users/luizferreira/delft3d/src/engines_gpl/waq/packages/waq_plugin_wasteload/src/.libs/libwaq_plugin_wasteload.dylib /Users/luizferreira/delft3d/src/utils_lgpl/nefis/packages/nefis/src_so/.libs/libnefis.dylib /Users/luizferreira/delft3d/src/third_party_open/libsigwatch/.libs/libsigwatch.dylib -luuid ../../../../../utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/.libs/libkdtreewrapper.a ../../../../../utils_lgpl/gridgeom/packages/gridgeom/src/.libs/libgridgeom.a -ldl -lexpat -lstdc++ -lnetcdf -lnetcdff -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpiUndefined symbols for architecture x86_64:  "_FILE_SEEK_not_defined", referenced from:      import-atom in libdflowfm.dylib  "_FILE_TELL_not_defined", referenced from:      import-atom in libdflowfm.dylibld: symbol(s) not found for architecture x86_64" 
Luiz Ferreira, modified 3 Years ago.

RE: Error in Delft3d Compilation - v67888 in macOS Catalina 10.15.7 (19H2)

Youngling Posts: 4 Join Date: 9/13/20 Recent Posts
All the errors in compilation:

||||||||1-
/scr/test/utils_lgpl
luizferreira@MBP-de-Luiz utils_lgpl % make
Making all in deltares_common
Making all in packages
Making all in test_deltares_common
Making all in src
mpif90  -I../../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I../../../../../../utils_lgpl/ftnunit/packages/ftnunit/src -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp -c -o test_properties.o  test_properties.f90
test_properties.f90:278:31:  278 |     expected = [ 'A', 'B', 'C', '' , 'D', 'E', '?', '?', '?', '?' ]
      |                               1
Error: Different CHARACTER lengths (1/0) in array constructor at (1)
make[4]: *** [test_properties.o] Error 1
make[3]: *** [all-recursive] Error 1
make[2]: *** [all-recursive] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

||||||||2-
/scr/test/utils_lgpl
Making all in src
mpif90  -I../../../../../../utils_lgpl/gridgeom/packages/gridgeom/src -I../../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I../../../../../../utils_lgpl/ftnunit/packages/ftnunit/src -I../../../../../../utils_gpl/flow1d/packages/flow1d_core/src -I../../../../../../utils_gpl/flow1d/packages/flow1d_io/src -I../../../../../../engines_gpl/dflowfm/packages/dflowfm_kernel/src -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp -c -o test_observations.o  test_observations.f90
test_observations.f90:105:8:  105 |     use ifport
      |        1
Fatal Error: Cannot open module file 'ifport.mod' for reading at (1): No such file or directory
compilation terminated.
make[4]: *** [test_observations.o] Error 1
make[3]: *** [all-recursive] Error 1
make[2]: *** [all-recursive] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

||||||||3-
/src/engines_gpl/dflowfm/packages
Making all in src
/bin/sh ../../../../../libtool  --tag=FC   --mode=link mpif90   -DWITH_DELFTONLINE   -DHAVE_DISPLAY=0 -I/opt/local/include -I/opt/local/include      -g -O2 -ffree-line-length-none -cpp   -o dflowfm net_main.o ../../../../../engines_gpl/dflowfm/packages/dflowfm_kernel/src/libdflowfm.la ../../../../../utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/libkdtreewrapper.la ../../../../../utils_lgpl/gridgeom/packages/gridgeom/src/libgridgeom.la  -ldl -lexpat -lstdc++  -L/opt/local/lib -lnetcdf -L/opt/local/lib -lnetcdff -lnetcdff -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/opt/local/lib/openmpi-mp -L/opt/local/lib -L/opt/local/lib/openmpi-mp -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -I/opt/local/include/openmpi-mp -Wl,-flat_namespace -Wl,-commons,use_dylibs -I/opt/local/lib/openmpi-mp -L/opt/local/lib -L/opt/local/lib/openmpi-mp -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi
libtool: link: mpif90 -DWITH_DELFTONLINE -DHAVE_DISPLAY=0 -I/opt/local/include -I/opt/local/include -g -O2 -ffree-line-length-none -cpp -o .libs/dflowfm net_main.o -Wl,-flat_namespace -Wl,-commons -Wl,use_dylibs -I/opt/local/lib/openmpi-mp -I/opt/local/include/openmpi-mp -Wl,-flat_namespace -Wl,-commons -Wl,use_dylibs -I/opt/local/lib/openmpi-mp  ../../../../../engines_gpl/dflowfm/packages/dflowfm_kernel/src/.libs/libdflowfm.dylib -L/opt/local/lib -L/opt/local/lib/openmpi-mp /Users/luizferreira/delft3d-org/v67888/src/engines_gpl/waq/packages/waq_plugin_wasteload/src/.libs/libwaq_plugin_wasteload.dylib /Users/luizferreira/delft3d-org/v67888/src/utils_lgpl/nefis/packages/nefis/src_so/.libs/libnefis.dylib /Users/luizferreira/delft3d-org/v67888/src/third_party_open/libsigwatch/.libs/libsigwatch.dylib -luuid ../../../../../utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/.libs/libkdtreewrapper.a ../../../../../utils_lgpl/gridgeom/packages/gridgeom/src/.libs/libgridgeom.a -ldl -lexpat -lstdc++ -lnetcdf -lnetcdff -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi
Undefined symbols for architecture x86_64:
  "_FILE_SEEK_not_defined", referenced from:
      import-atom in libdflowfm.dylib
  "_FILE_TELL_not_defined", referenced from:
      import-atom in libdflowfm.dylib
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make[3]: *** [dflowfm] Error 1
make[2]: *** [all-recursive] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

||||||||4-
/src/engines_gpl/wave/packages
Making all in src
/bin/sh ../../../../../libtool  --tag=FC   --mode=link mpif90 -I../../../../../engines_gpl/wave/packages/wave/include -I../../../../../engines_gpl/wave/packages/data/src -I../../../../../engines_gpl/wave/packages/manager/src -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I../../../../../utils_lgpl/ec_module/packages/ec_module/src/meteo -I../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src -I../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp   -o wave wave_exe.o ../../../../../engines_gpl/wave/packages/manager/src/libmanager.la ../../../../../engines_gpl/wave/packages/kernel/src/libkernel.la ../../../../../engines_gpl/wave/packages/io/src/libio.la ../../../../../engines_gpl/wave/packages/data/src/libdata.la ../../../../../utils_lgpl/gridgeom/packages/gridgeom/src/libgridgeom.la ../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync/libDelftIO.la ../../../../../utils_lgpl/esmfsm/packages/esmfsm/src/fsm/libESMFSM.la ../../../../../utils_lgpl/ec_module/packages/ec_module/src/libECModule.la ../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src/libIONetcdf.la ../../../../../utils_lgpl/nefis/packages/nefis/src/libNefis.la ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/libDeltaresCommon.la ../../../../../utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/libkdtreewrapper.la ../../../../../third_party_open/kdtree2/src-f90/libkdtree2f.la ../../../../../third_party_open/triangle/libtriangle_c.la -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm -lpthread  -ldl -lexpat -lstdc++
libtool: link: mpif90 -I../../../../../engines_gpl/wave/packages/wave/include -I../../../../../engines_gpl/wave/packages/data/src -I../../../../../engines_gpl/wave/packages/manager/src -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -I../../../../../utils_lgpl/ec_module/packages/ec_module/src/meteo -I../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src -I../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync -DWITH_DELFTONLINE -g -O2 -ffree-line-length-none -cpp -o wave wave_exe.o  ../../../../../engines_gpl/wave/packages/manager/src/.libs/libmanager.a ../../../../../engines_gpl/wave/packages/kernel/src/.libs/libkernel.a ../../../../../engines_gpl/wave/packages/io/src/.libs/libio.a -L/opt/local/lib ../../../../../engines_gpl/wave/packages/data/src/.libs/libdata.a ../../../../../utils_lgpl/gridgeom/packages/gridgeom/src/.libs/libgridgeom.a ../../../../../utils_lgpl/delftio/packages/delftio/src/delftio_sync/.libs/libDelftIO.a ../../../../../utils_lgpl/esmfsm/packages/esmfsm/src/fsm/.libs/libESMFSM.a ../../../../../utils_lgpl/ec_module/packages/ec_module/src/.libs/libECModule.a -lnetcdf -lnetcdff ../../../../../utils_lgpl/io_netcdf/packages/io_netcdf/src/.libs/libIONetcdf.a ../../../../../utils_lgpl/nefis/packages/nefis/src/.libs/libNefis.a ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/.libs/libDeltaresCommon.a ../../../../../utils_lgpl/kdtree_wrapper/packages/kdtree_wrapper/src/.libs/libkdtreewrapper.a ../../../../../third_party_open/kdtree2/src-f90/.libs/libkdtree2f.a ../../../../../third_party_open/triangle/.libs/libtriangle_c.a -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm -lpthread -ldl -lexpat -lstdc++
Undefined symbols for architecture x86_64:
  "_FILE_SEEK_not_defined", referenced from:
      _cutil_mf_backspace_ in libDeltaresCommon.a(cutil.o)
  "_FILE_TELL_not_defined", referenced from:
      _cutil_mf_read_ in libDeltaresCommon.a(cutil.o)
      _cutil_mf_getpos_ in libDeltaresCommon.a(cutil.o)
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make[2]: *** [wave] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

||||||||5-
/src/tools_gpl/datsel/packages
Making all in src
/bin/sh ../../../../../libtool  --tag=CXX   --mode=link mpicxx -D_GNU_SOURCE -DSTR_LEN_AT_END -DWITH_DELFTONLINE -g -O2   -o datsel main.o ../../../../../tools_gpl/datsel/packages/datsel_f/src/libdatsel_f.la ../../../../../tools_gpl/datsel/packages/datsel_version_number/src/libdatsel_version_number.la ../../../../../utils_lgpl/nefis/packages/nefis/src/libNefis.la ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/libDeltaresCommon.la -ldl -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm  -ldl -lexpat -lstdc++
libtool: link: mpicxx -D_GNU_SOURCE -DSTR_LEN_AT_END -DWITH_DELFTONLINE -g -O2 -o datsel main.o -Wl,-bind_at_load  ../../../../../tools_gpl/datsel/packages/datsel_f/src/.libs/libdatsel_f.a ../../../../../tools_gpl/datsel/packages/datsel_version_number/src/.libs/libdatsel_version_number.a ../../../../../utils_lgpl/nefis/packages/nefis/src/.libs/libNefis.a ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/.libs/libDeltaresCommon.a -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm -ldl -lexpat -lstdc++
ld: warning: could not create compact unwind for _datsel_: stack subq instruction is too different from dwarf stack size
ld: warning: could not create compact unwind for _cutil_getmp_: stack subq instruction is too different from dwarf stack size
Undefined symbols for architecture x86_64:
  "_FILE_SEEK_not_defined", referenced from:
      _cutil_mf_backspace_ in libDeltaresCommon.a(cutil.o)
  "_FILE_TELL_not_defined", referenced from:
      _cutil_mf_read_ in libDeltaresCommon.a(cutil.o)
      _cutil_mf_getpos_ in libDeltaresCommon.a(cutil.o)
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [datsel] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

||||||||6-
/src/tools_gpl/mormerge/packages
mpif90 -DHAVE_CONFIG_H -I. -I../../../../..     -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp -c -o mormerge_version.o mormerge_version.F90
/bin/sh ../../../../../libtool  --tag=FC   --mode=link mpif90  -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp   -o mormerge mormerge_version.o mormerge.o merge.o ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/libDeltaresCommon.la -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm  -ldl -lexpat -lstdc++
libtool: link: mpif90 -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -DWITH_DELFTONLINE -g -O2 -ffree-line-length-none -cpp -o mormerge mormerge_version.o mormerge.o merge.o  ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/.libs/libDeltaresCommon.a -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm -ldl -lexpat -lstdc++
Undefined symbols for architecture x86_64:
  "_FILE_SEEK_not_defined", referenced from:
      _cutil_mf_backspace_ in libDeltaresCommon.a(cutil.o)
  "_FILE_TELL_not_defined", referenced from:
      _cutil_mf_read_ in libDeltaresCommon.a(cutil.o)
      _cutil_mf_getpos_ in libDeltaresCommon.a(cutil.o)
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make[2]: *** [mormerge] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

||||||||7-
/src/tools_gpl/nesthd1/packages
/Applications/Xcode.app/Contents/Developer/usr/bin/make  all-am
mpif90 -DHAVE_CONFIG_H -I. -I../../../../..    -I../../../../../tools_gpl/nesthd1/packages/nesthd1/include -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp -c -o nesthd1_version.o nesthd1_version.F90
/bin/sh ../../../../../libtool  --tag=F77   --mode=link mpif77 -I../../../../../tools_gpl/nesthd1/packages/nesthd1/include -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -DWITH_DELFTONLINE -g -O2 -ffixed-line-length-none   -o nesthd1 nesthd1_version.o distance.o nesthd1.o small.o newlun.o dattim.o detang.o detnst.o detxy.o dimbnd.o dimgrd.o files.o findmn.o getdim.o increm.o inigrd_n.o nearmn.o pinpol.o reabnd.o reargf.o wrinst.o wrista.o ../../../../../utils_lgpl/nefis/packages/nefis/src/libNefis.la ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/libDeltaresCommon.la -ldl -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm  -ldl -lexpat -lstdc++
libtool: link: mpif77 -I../../../../../tools_gpl/nesthd1/packages/nesthd1/include -I../../../../../utils_lgpl/deltares_common/packages/deltares_common/src -DWITH_DELFTONLINE -g -O2 -ffixed-line-length-none -o nesthd1 nesthd1_version.o distance.o nesthd1.o small.o newlun.o dattim.o detang.o detnst.o detxy.o dimbnd.o dimgrd.o files.o findmn.o getdim.o increm.o inigrd_n.o nearmn.o pinpol.o reabnd.o reargf.o wrinst.o wrista.o  ../../../../../utils_lgpl/nefis/packages/nefis/src/.libs/libNefis.a ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/.libs/libDeltaresCommon.a -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm -ldl -lexpat -lstdc++
Undefined symbols for architecture x86_64:
  "_FILE_SEEK_not_defined", referenced from:
      _cutil_mf_backspace_ in libDeltaresCommon.a(cutil.o)
  "_FILE_TELL_not_defined", referenced from:
      _cutil_mf_read_ in libDeltaresCommon.a(cutil.o)
      _cutil_mf_getpos_ in libDeltaresCommon.a(cutil.o)
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make[3]: *** [nesthd1] Error 1
make[2]: *** [all] Error 2
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

||||||||8-
/src/tools_gpl/nesthd2/packages
/Applications/Xcode.app/Contents/Developer/usr/bin/make  all-am
mpif90 -DHAVE_CONFIG_H -I. -I../../../../..    -I../../../../../tools_gpl/nesthd2/packages/nesthd2/include  -DWITH_DELFTONLINE  -g -O2 -ffree-line-length-none -cpp -c -o nesthd2_version.o nesthd2_version.F90
/bin/sh ../../../../../libtool  --tag=F77   --mode=link mpif77 -I../../../../../tools_gpl/nesthd2/packages/nesthd2/include  -DWITH_DELFTONLINE -g -O2 -ffixed-line-length-none   -o nesthd2 nesthd2_version.o nesthd2.o small.o newlun.o dattim.o addinp.o check.o chkdry.o corcon.o detcon.o d3stop.o dethyd.o dimbnd.o files.o getdim.o getwgh.o hyd2dh.o nest_hd2.o nefis.o reabnd.o wricon.o wricon2.o wrihyd.o wrihyd2.o wrista.o ../../../../../utils_lgpl/nefis/packages/nefis/src/libNefis.la ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/libDeltaresCommon.la -ldl -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm  -ldl -lexpat -lstdc++
libtool: link: mpif77 -I../../../../../tools_gpl/nesthd2/packages/nesthd2/include -DWITH_DELFTONLINE -g -O2 -ffixed-line-length-none -o nesthd2 nesthd2_version.o nesthd2.o small.o newlun.o dattim.o addinp.o check.o chkdry.o corcon.o detcon.o d3stop.o dethyd.o dimbnd.o files.o getdim.o getwgh.o hyd2dh.o nest_hd2.o nefis.o reabnd.o wricon.o wricon2.o wrihyd.o wrihyd2.o wrista.o  ../../../../../utils_lgpl/nefis/packages/nefis/src/.libs/libNefis.a ../../../../../utils_lgpl/deltares_common/packages/deltares_common/src/.libs/libDeltaresCommon.a -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0 -L/opt/local/lib/gcc9/gcc/x86_64-apple-darwin19/9.3.0/../../.. -lgfortran -lquadmath -lm -ldl -lexpat -lstdc++
Undefined symbols for architecture x86_64:
  "_FILE_SEEK_not_defined", referenced from:
      _cutil_mf_backspace_ in libDeltaresCommon.a(cutil.o)
  "_FILE_TELL_not_defined", referenced from:
      _cutil_mf_read_ in libDeltaresCommon.a(cutil.o)
      _cutil_mf_getpos_ in libDeltaresCommon.a(cutil.o)
ld: symbol(s) not found for architecture x86_64
collect2: error: ld returned 1 exit status
make[3]: *** [nesthd2] Error 1
make[2]: *** [all] Error 2
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

||||||||9-
/src/tools_gpl/waq_run_processes/packages
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../include -D_GNU_SOURCE -DSTR_LEN_AT_END -DWITH_DELFTONLINE -g -O2 -MT f2c.lo -MD -MP -MF .deps/f2c.Tpo -c f2c.c -o f2c.o >/dev/null 2>&1
depbase=`echo version.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\
    /bin/sh ../../../../../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../include   -D_GNU_SOURCE -DSTR_LEN_AT_END -DWITH_DELFTONLINE  -g -O2 -MT version.lo -MD -MP -MF $depbase.Tpo -c -o version.lo version.c &&\
    mv -f $depbase.Tpo $depbase.Plo
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../include -D_GNU_SOURCE -DSTR_LEN_AT_END -DWITH_DELFTONLINE -g -O2 -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c  -fno-common -DPIC -o .libs/version.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../../../../.. -I../include -D_GNU_SOURCE -DSTR_LEN_AT_END -DWITH_DELFTONLINE -g -O2 -MT version.lo -MD -MP -MF .deps/version.Tpo -c version.c -o version.o >/dev/null 2>&1
/bin/sh ../../../../../libtool  --tag=CC   --mode=link gcc -D_GNU_SOURCE -DSTR_LEN_AT_END -DWITH_DELFTONLINE  -g -O2   -o libwaq_run_processes_version_number.la  c2c.lo f2c.lo version.lo  -ldl -lexpat -lstdc++
libtool: link: rm -fr  .libs/libwaq_run_processes_version_number.a .libs/libwaq_run_processes_version_number.la
libtool: link: ar cru .libs/libwaq_run_processes_version_number.a .libs/c2c.o .libs/f2c.o .libs/version.o
libtool: link: ranlib .libs/libwaq_run_processes_version_number.a
libtool: link: ( cd ".libs" && rm -f "libwaq_run_processes_version_number.la" && ln -s "../libwaq_run_processes_version_number.la" "libwaq_run_processes_version_number.la" )
make[2]: Nothing to be done for `all-am'.
Making all in waq_run_processes
Making all in src
make[2]: *** No rule to make target `../../../../../tools/waq_run_processes/packages/waq_run_processes_version_number/src/libwaq_run_processes_version_number.la', needed by `run_processes'.  Stop.
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1