intro story Coast / Estuary

Coast / Estuary

Coastal systems are among the most dynamic physical systems on earth and are subject to a large variety of forces. The morphodynamic changes occurring to coastlines worldwide are of great interest and importance. These changes occur as a result of the erosion of sediments, its subsequent transport as bed load or suspended load, and eventual deposition. 
 
Estuaries are partly enclosed water bodies that have an open connection to the coast. Estuaries generally have one or more branching channels, intertidal mudflats and/or salt marshes. Intertidal areas are of high ecological importance and trap sediments (sands, silts, clays and organic matter).
Within the Delft3D modelling package a large variation of coastal and estuarine physical and chemical processes can be simulated. These include waves, tidal propagation, wind- or wave-induced water level setup, flow induced by salinity or temperature gradients, sand and mud transport, water quality and changing bathymetry (morphology). Delft3D can also be used operationally e.g. storm, surge and algal bloom forecasting. 
 
On this discussion page you can post questions, research discussions or just share your experience about modelling coastal and/or estuarine systems with Delft3D FM. 
 

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Sub groups
D-Flow Flexible Mesh
DELWAQ
Cohesive sediments & muddy systems

 

 

Message Boards

Settling of algae on the sediment

SZ
Stephanie Zeunert, modified 5 Years ago.

Settling of algae on the sediment

Youngling Posts: 14 Join Date: 6/2/14 Recent Posts
Hi everyone,

At the moment I’m trying to figure out how to include the settling of algae on the sediment and the subsequent conversion into DetC/N/PS1. For the modelling of the sediment I’m using the S1/2 approach. Algae are modelled with DYNAMO. According to the WAQ User Manual for DYNAMO algae biomass only settles in DetC/N/PS1 (Chapter 4.3). I’d like to use the processes SED_GRE and SEDN_ALG, but unfortunately I can’t find the second process in the PLCT. Maybe I’m missing something or I’m not using the newest version of the PLCT (my version is 5.04). I would really appreciate it, if you had some advice for me.

Thanks
Stephanie
AA
Anonymous Anonymous, modified 5 Years ago.

RE: Settling of algae on the sediment

Jedi Master Posts: 333 Join Date: 7/30/20 Recent Posts
Hi Stephanie,

I'm guessing you're looking for SedN_Alg because of this bit of text from the Technical Reference Manual:

Process SEDPHDYN delivers the settling rate of total algae biomass (C). The settling rates of the nutrients in algae biomass (C,N,P,Si) for DYNAMO are calculated by process SEDN_ALG, that uses input parameters for the stochiometric ratios.

Congratulations, you found an error in the manual. SEDN_ALG does no longer exists and has been merged with SEDPHDYN, which now takes care of translating sedimenting algae biomass (sum of Diats and Greens) to DetxS1 (x = C, N, P and Si) fluxes, based on stochiometric ratios.

Hope this helps.
SZ
Stephanie Zeunert, modified 5 Years ago.

RE: Settling of algae on the sediment

Youngling Posts: 14 Join Date: 6/2/14 Recent Posts
Hi Christophe,

Thank you for your answer. Unfortunately I can't find this process in the PLCT either.
For which substances is it implemented?

Regards
Stephanie
AA
Anonymous Anonymous, modified 5 Years ago.

RE: Settling of algae on the sediment (Answer)

Jedi Master Posts: 333 Join Date: 7/30/20 Recent Posts
Dear Stephanie,

Process SedPhDyn was indeed not visible in the PLCT. This has been fixed in revision 4812.
You can activate the process when modelling substances like DetNS1, DetPS1, etc... (from group organic matter).

I have attached the corresponding library. If you are using a recent revision, copying this library to your installation folder should be enough. If not, you'll have to update your whole installation.
SZ
Stephanie Zeunert, modified 5 Years ago.

RE: Settling of algae on the sediment

Youngling Posts: 14 Join Date: 6/2/14 Recent Posts
Hi Christophe,

It's working now. Many thanks for your help!

Stephanie