intro story D-Flow FM

 

D-Flow Flexible Mesh

D-Flow Flexible Mesh (D-Flow FM) is the new software engine for hydrodynamical simulations on unstructured grids in 1D-2D-3D. Together with the familiar curvilinear meshes from Delft3D 4, the unstructured grid can consist of triangles, pentagons (etc.) and 1D channel networks, all in one single mesh. It combines proven technology from the hydrodynamic engines of Delft3D 4 and SOBEK 2 and adds flexible administration, resulting in:

  • Easier 1D-2D-3D model coupling, intuitive setup of boundary conditions and meteorological forcings (amongst others).
  • More flexible 2D gridding in delta regions, river junctions, harbours, intertidal flats and more.
  • High performance by smart use of multicore architectures, and grid computing clusters.
An overview of the current developments can be found here.
 
The D-Flow FM - team would be delighted if you would participate in discussions on the generation of meshes, the specification of boundary conditions, the running of computations, and all kinds of other relevant topics. Feel free to share your smart questions and/or brilliant solutions! 

 

=======================================================
We have launched a new website (still under construction so expect continuous improvements) and a new forum dedicated to Delft3D Flexible Mesh.
Please follow this link to the new forum: 
/web/delft3dfm/forum
Post your questions, issues, suggestions, difficulties related to our Delft3D Flexible Mesh Suite on the new forum.

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Sub groups
D-Flow Flexible Mesh
DELWAQ
Cohesive sediments & muddy systems

 

Message Boards

Sucess in the compilation of Delft3D - Cluster Red Hat 64bits

LS
LUIS HENRIQUE SILVA, modified 8 Years ago.

Sucess in the compilation of Delft3D - Cluster Red Hat 64bits

Youngling Posts: 12 Join Date: 9/30/11 Recent Posts
Hi Fedor,

after downloading the latest "trunk" i had sucess in the compilation of Delft3D.

For the compilation of the Delft3D in a cluster with the following configuration:

- Red Hat Enterprise Linux Server release 6.1 (Santiago)
- Linux 2.6.32-robura 131.0.15.el6.x86_64 # 1 SMP Tue May 10 15:42:40 EDT 2011 x86_64 x86_64 x86_64 GNU / Linux
- Intel (R) Fortran Intel (R) 64 Compiler Professional for applications running on Intel (R) 64, Version 11.1
- MPICH2

Follow the following steps:

1. Downloaded the latest version of the "trunk"
2. Installed the package - libtool-ltdl-devel
3. Other necessary libraries, in the Webinar "How to compile under Linux Delft 3D"
4. Delete lines Makefile.am, in folder utils_lgpl/delftonline/
src / dolcli \
src / dolprint
* Solution as found in the Forum

5. Configure
CFLAGS = '-O2-fPIC-m64' CXXFLAGS = '-O2-fPIC-m64 "FFLAGS ='-O2-fPIC-m64 'FCFLAGS ='-O2-fPIC-m64 -L/usr/lib64 'LDFLAGS =-L/usr/lib64 ./configure --prefix =/delft3compilado

6. make install-ds

After following these steps, the last messages on the screen were the ones that are written plus below.

However when viewing the directory "lib" and "bin", all files have created correctly.

Therefore, put on in Bashrc the following commands:
# Delft3D
export PATH=/delft3compilado/bin:$PATH
export LD_LIBRARY_PATH=/delft3compilado/lib:$LD_LIBRARY_PATH

In test the execution of the model with the example 01_standard, I had the following result:

-------------------------------------------------- ----------------------------
FINISHED Delft3D-FLOW
runid: F34
date, time: 07.05.2012, 09:04:08
0 errors and 0 warnings
returning to main program from F34 domain
-------------------------------------------------- ----------------------------
D_Hydro [1341497048.191692] >> <anonymous> d_hydro Normally shutting down


Regards

Luis Marton

=====================================================================
Messages displayed on the screen after the compilation of Delft3d:
=====================================================================

( \
cd . ; \
./install.sh ../bin \
)
oss-install...
Target directory: ../bin
Source : all engines
installing all open source projects . . .
installing d_hydro . . .
cp: cannot stat `bin/d_hydro.exe': No such file or directory
can't copy "bin/d_hydro.exe" to "../bin/lnx/flow2d3d/bin"
Gathering libraries for d_hydro...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing flow2d3d . . .
cp: cannot stat `lib/libflow2d3d.so': No such file or directory
can't copy "lib/libflow2d3d.so" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `lib/libflow2d3d_sp.so': No such file or directory
can't copy "lib/libflow2d3d_sp.so" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `lib/libDelftOnline.so': No such file or directory
can't copy "lib/libDelftOnline.so" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `bin/esm_create': No such file or directory
can't copy "bin/esm_create" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `bin/esm_delete': No such file or directory
can't copy "bin/esm_delete" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `bin/esm_info': No such file or directory
can't copy "bin/esm_info" to "../bin/lnx/flow2d3d/bin"
Gathering libraries for flow2d3d...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing flow2d3d_openda . . .
cp: cannot stat `lib/libflow2d3d_openda.so': No such file or directory
can't copy "lib/libflow2d3d_openda.so" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `lib/libflow2d3d_openda_sp.so': No such file or directory
can't copy "lib/libflow2d3d_openda_sp.so" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `lib/libDelftOnline.so': No such file or directory
can't copy "lib/libDelftOnline.so" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `bin/esm_create': No such file or directory
can't copy "bin/esm_create" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `bin/esm_delete': No such file or directory
can't copy "bin/esm_delete" to "../bin/lnx/flow2d3d/bin"
cp: cannot stat `bin/esm_info': No such file or directory
can't copy "bin/esm_info" to "../bin/lnx/flow2d3d/bin"
Gathering libraries for flow2d3d_openda...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing wave . . .
cp: cannot stat `bin/wave.exe': No such file or directory
can't copy "bin/wave.exe" to "../bin/lnx/wave/bin"
Gathering libraries for wave...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/wave/lib'
Try `cp --help' for more information.
... Finished gathering libraries
Gathering libraries for swan...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/swan/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing plugin_culvert . . .
cp: cannot stat `lib/libplugin_culvert.so': No such file or directory
can't copy "lib/libplugin_culvert.so" to "../bin/lnx/flow2d3d/bin/plugin_culvert.so"
Gathering libraries for plugin_culvert...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing plugin_delftflow_traform . . .
cp: cannot stat `lib/libplugin_delftflow_traform.so': No such file or directory
can't copy "lib/libplugin_delftflow_traform.so" to "../bin/lnx/flow2d3d/bin/plugin_delftflow_traform.so"
Gathering libraries for plugin_delftflow_traform...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing datsel . . .
cp: cannot stat `bin/datsel': No such file or directory
can't copy "bin/datsel" to "../bin/lnx/flow2d3d/bin"
Gathering libraries for datsel...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing kubint . . .
cp: cannot stat `bin/kubint': No such file or directory
can't copy "bin/kubint" to "../bin/lnx/flow2d3d/bin"
Gathering libraries for kubint...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing lint . . .
cp: cannot stat `bin/lint': No such file or directory
can't copy "bin/lint" to "../bin/lnx/flow2d3d/bin"
Gathering libraries for lint...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing mormerge . . .
cp: cannot stat `bin/mormerge.exe': No such file or directory
can't copy "bin/mormerge.exe" to "../bin/lnx/flow2d3d/bin"
Gathering libraries for mormerge...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/flow2d3d/lib'
Try `cp --help' for more information.
... Finished gathering libraries
installing vs . . .
cp: cannot stat `bin/vs': No such file or directory
can't copy "bin/vs" to "../bin/lnx/util/bin"
Gathering libraries for vs...
scripts_lgpl/linux/oss-install.sh: scripts_lgpl/linux/gatherlibraries.rb: /usr/bin/ruby: bad interpreter: No such file or directory
cp: missing destination file operand after `../bin/lnx/util/lib'
Try `cp --help' for more information.
... Finished gathering libraries